長江 雅倫 Masamichi Nagae

長江 雅倫 Masamichi Nagae

業績

Masamichi Nagae*, Yoshiki Yamaguchi, Naoyuki Taniguchi, and Yasuhiko Kizuka* (* Co-correspondence authors)
3D structure and function of glycosyltransferases involved in N-glycan maturation
International Journal of Molecular Science in press

Masamichi Nagae* and Yoshiki Yamaguchi* (* Co-correspondence authors)
Structural Aspects of Carbohydrate Recognition Mechanisms of C-Type Lectins.
Curr. Top. Microbiol. Immunol. 2019 Nov 29. doi: 10.1007/82_2019_181.

Masamichi Nagae*,**, Yasuhiko Kizuka**, Emiko Mihara, Yu Kitago, Shinya Hanashima, Yukishige Ito, Junichi Takagi, Naoyuki Taniguchi and Yoshiki Yamaguchi (* correspondence author, ** equal contribution)
Structure and mechanism of cancer-associated N-acetylglucosaminyltransferase-V
Nature Communications 9(1):3380 (2018)

Akitsugu Suga, Masamichi Nagae and Yoshiki Yamaguchi
Statistical analysis of N-glycosylated protein structures suggests a possible role of intramolecular glycan-protein interaction in N-glycan processing and maturation
Glycobiology 28(10):774-785 (2018)

Masamichi Nagae and Yoshiki Yamaguchi
Biophysical analyses for probing glycan-protein interactions
Adv Exp Med Biol. 2018;1104:119-147. doi: 10.1007/978-981-13-2158-0_7.
(Edited by Koichi Kato and Yoshiki Yamaguchi, Springer Nature Singapore Pte Ltd.)

Masamichi Nagae*, Sushil K. Mishra*, Shinya Hanashima, Hiroaki Tateno and Yoshiki Yamaguchi (* equal contributor)
Distinct roles for each N-glycan branch interacting with mannose-type Jacalin-related lectins Orysata and Calsepa
Glycobiology 27(12):1120-1133 (2017)

Masamichi Nagae, Sushil K. Mishra, Makiko Neyazaki, Rika Oi, Akemi Ikeda, Naohiro Matsugaki, Satoko Akashi, Hiroshi Manya, Mamoru Mizuno, Hirokazu Yagi, Koichi Kato, Toshiya Senda, Tamao Endo, Terukazu Nogi and Yoshiki Yamaguchi
3D structural analysis of Protein O-Mannosyl Kinase POMK, a causative gene product of dystroglycanopathy
Genes to Cells 22 (4): 348-359 (2017) 

Masamichi Nagae, Dorothee Liebschner, Yusuke Yamada, Kana Morita-Matsumoto, Naohiro Matsugaki, Toshiya Senda, Morihisa Fujita, Taroh Kinoshita and Yoshiki Yamaguchi
Crystallographic analysis of murine p24γ2 Golgi Dynamics (GOLD) domain
Proteins: Structure, Function, and Bioinformatics 85 (4): 764-770 (2017)

Masamichi Nagae, Tetsuya Hirata, Kana Morita-Matsumoto, Romina Theiler, Morihisa Fujita, Taroh Kinoshita and Yoshiki Yamaguchi
3D structure and interaction of p24β and p24δ Golgi dynamics domains: implication for p24 complex formation and cargo transport
Journal of Molecular Biology 428, 4087-4099 (2016)

Hari Prasad Dulal, Masamichi Nagae, Akemi Ikeda, Kana Morita-Matsumoto, Yoshiyuki Adachi, Naohito Ohno, and Yoshiki Yamaguchi Enhancement of solubility and yield of a β-glucan receptor Dectin-1 C-type lectin-like domain in Escherichia coli with a solubility-enhancement tag.
Protein Expression and Purification 123, 97-104 (2016)

Masamichi Nagae, Akemi Ikeda, Shinya Hanashima, Takumi Kojima, Naoki Matsumoto, Kazuo Yamamoto and Yoshiki Yamaguchi
Crystal structure of human dendritic cell inhibitory receptor (DCIR) C-type lectin domain reveals the binding mode with N-glycan
FEBS Letter 590(8), 1280-8 (2016)

Masamichi Nagae, Mayumi Kanagawa, Kana Morita-Matsumoto, Shinya Hanashima, Yasuhiko Kizuka, Naoyuki Taniguchi and Yoshiki Yamaguchi 
Atomic visualization of a flipped-back conformation of bisected glycans bound to specific lectins
Scientific Reports 6 22973 (2016)

Masamichi Nagae and Yoshiki Yamaguchi
Sugar recognition and protein-protein interaction of mammalian lectins conferring diverse functions
Current Opinion in Structural Biology 34, 108-115 (2015)

 Yuka Matsumoto, Toshie Saito, Kyoka Hoshi, Hiromi Ito, Yoshinobu Kariya, Masamichi Nagae, Yoshiki Yamaguchi, Yoshiaki Hagiwara, Noriaki Kinoshita, Ikuo Wada, Kiyoshi Saito, Takashi Honda, Yasuhiro Hashimoto
In situ visualization of a glycoform of transferrin: Localization of α2,6-sialylated transferrin in the liver
Journal of Biochemistry 157(4): 211-216 (2015)

Yu Kitago*, Masamichi Nagae*, Zenzaburo Nakata*, Maho Yagi-Utsumi, Shizuka Takagi-Niidome, Emiko Mihara, Terukazu Nogi, Koichi Kato, and Junichi Takagi (*; equal contributors)
Structural basis for amyloidogenic peptide recognition by sorLA
Nature Structural & Molecular Biology 22(3): 199-206 (2015)

Masamichi Nagae, Kana Morita-Matsumoto, Masaki Kato, Mika Kato Kaneko, Yukinari Kato and Yoshiki Yamaguchi
A platform of C-type lectin-like receptor CLEC-2 for binding O-glycosylated podoplanin and nonglycosylated rhodocytin
Structure 22(12): 1711-1721 (2014)

Romina Theiler, Morihisa Fujita, Masamichi Nagae, Yoshiki Yamaguchi, Yusuke Maeda, and Taroh Kinoshita
The α-Helical Region in p24γ2 Subunit of p24 Protein Cargo Receptor Is Pivotal for the Recognition and Transport of Glycosylphosphatidylinositol-anchored Proteins
Journal of Biological Chemistry 289(24):16835-16843 (2014)

Masamichi Nagae*, Kana Morita-Matsumoto*, Seisuke Arai, Ikuo Wada, Yuka Matsumoto, Kiyoshi Saito, Yasuhiro Hashimoto, and Yoshiki Yamaguchi (*; equal contributors)
Structural change of N-glycan exposes hydrophobic surface of human transferrin
Glycobiology 24, 693-702 (2014)

Masamichi Nagae, and Yoshiki Yamaguchi
Three-dimensional structural aspects of protein-polysaccharide interactions
International Journal of Molecular Science 15, 3768-83 (2014)

Masamichi Nagae, Keisuke Soga, Kana Morita-Matsumoto, Shinya Hanashima, Akemi Ikeda, Kazuo Yamamoto and Yoshiki Yamaguchi
Phytohemagglutinin from Phaseolus vulgaris (PHA-E) displays a novel glycan recognition mode using a common legume lectin fold
Glycobiology 24, 368-78 (2014)

Masamichi Nagae, Akemi Ikeda, Yu Kitago, Naoki Matsumoto, Kazuo Yamamoto, and Yoshiki Yamaguchi
Crystal structures of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2 (BDCA2) reveal a common domain-swapped dimer
Proteins: Structure, function, and Bioinformatics 82(7):1512-8 (2014)

Masamichi Nagae, Kousuke Yamanaka, Shinya Hanashima, Akemi Ikeda, Kana Morita-Matsumoto, Tadashi Satoh, Naoki Matsumoto, Kazuo Yamamoto, and Yoshiki Yamaguchi
Recognition of bisecting N-acetylglucosamine: Structural basis for the asymmetric interaction attained by mouse dendritic cell inhibitory receptor 2
Journal of Biological Chemistry 288(47), 33598-610 (2013)

Masamichi Nagae, Akemi Ikeda, Masaya Hane, Shinya Hanashima, Ken Kitajima, Chihiro Sato, and Yoshiki Yamaguchi
Crystal structure of anti-polysialic acid antibody single chain Fv fragment complexed with octasialic acid: Insight into the binding preference for polysialic acid
Journal of Biological Chemistry 288(47), 33784-96 (2013)

Kyoka Hoshi, Yoshinobu Kariya, Kiyomitsu Nara, Hiromi Ito, Kana Matsumoto, Masamichi Nagae, Yoshiki Yamaguchi, Madoka Nakajima, Masakazu Miyajima, Hajime Arai, Atsushi Kuno, Hisashi Narimatsu, Keiro Shirotani and Yasuhiro Hashimoto
Lectin-dependent inhibition of antigen-antibody reaction: Application for measuring α2,6-sialylated glycoform of transferrin
Journal of Biochemistry 154, 229-232 (2013)

Masamichi Nagae, and Yoshiki Yamaguchi
Function and 3D structure of the N-glycans on glycoproteins
International Journal of Molecular Science 13, 8398-8429 (2012)

Masamichi Nagae, Suyong Re, Emiko Mihara, Terukazu Nogi, Yuji Sugita, and Junichi Takagi
Crystal structure of α5β1 integrin ectodomain: Atomic details of the fibronectin receptor
Journal of Cell Biology 197, 131-140 (2012)

Norihisa Yasui, Yu Kitago, Ayako Beppu, Takao Kohno, Shunsuke Morishita, Hiroki Gomi, Masamichi Nagae, Mitsuharu Hattori, and Junichi Takagi
Functional importance of covalent homodimer of reelin linked via its central region
Journal of Biological Chemistry 286, 35247-56 (2011)

Zenzaburo Nakata, Masamichi Nagae, Norihisa Yasui, Hideaki Bujo, Terukazu Nogi, and Junichi Takagi
Crystallization and preliminary crystallographic analysis of human LR11 Vps10p domain
Acta Crystallographica SectF67 129-132 (2011)

Masamichi Nagae, Nozomu Nishi, Takeomi Murata, Taichi Usui, Takanori Nakamura, Soichi Wakatsuki, Ryuichi Kato
Structural analysis on the recognition mechanism of poly-N-acetyllactosamine by the human galectin-9 N-terminal carbohydrate recognition domain
Glycobiology 19, 112-117 (2009)

Jun Wada, Yuji Honda, Masamichi Nagae, Ryuichi Kato, Soichi Wakatsuki, Takane Katayama, Hajime Taniguchi, Hidehiko Kumagai, Motomitsu Kitaoka, Kenji Yamamoto
1,2-α-L-Fucosynthase: A glycosynthase derived from an inverting α-glycosidase with an unusual reaction mechanism
FEBS Letter 582, 3739-43 (2008)

Terukazu Nogi, Takeshi Sangawa, Sanae Tabata, Masamichi Nagae, Keiko Tamura-Kawakami, Ayako Beppu, Mitsuharu Hattori, Norihisa Yasui, and Junichi Takagi
Novel affinity tag system using structurally defined antibody-tag interaction: Application to single-step protein purification
Protein Science 17, 2120-2126 (2008)

Masamichi Nagae, Ken Nishikawa, Norihisa Yasui, Motoo Yamasaki, Terukazu Nogi, Junichi Takagi
Structure of F-spondin reeler domain reveals a unique β-sandwich fold with a deformable disulfide-bonded loop
Acta Crystallographica Sect D64, 1138-1145 (2008)

Masamichi Nagae, Nozomu Nishi, Sachiko Nakamura-Tsuruta, Jun Hirabayashi, Soichi Wakatsuki, Ryuichi Kato
Structural analysis of the human galectin-9 N-terminal carbohydrate recognition domain reveals unexpected properties that differ from the mouse orthologue
Journal of Molecular Biology 375, 119-135 (2008)

Masamichi Nagae, Atsuko Tsuchiya, Takane Katayama, Kenji Yamamoto, Soichi Wakatsuki, Ryuichi Kato
Structural basis on the catalytic reaction mechanism of novel 1,2-α-L-fucosidase (AfcA) from Bifidobacterium bifidum
Journal of Biological Chemistry 282, 18497-509 (2007)

Masamichi Nagae, Nozomu Nishi, Takeomi Murata, Taichi Usui, Takanori Nakamura, Soichi Wakatsuki, Ryuichi Kato
Crystal structure of the galectin-9 N-terminal CRD from Mus musculus reveals basic mechanism of carbohydrate recognition 
Journal of Biological Chemistry 281, 35884-35893 (2006)

Masahiko Hiraki, Ryuichi Kato, Minoru Nagai, Tadashi Satoh, Satoshi Hirano, Kentaro Ihara, Norio Kudo, Masamichi Nagae, Masanori Kobayashi, Michio Inoue, Tamami Uejima, Shunichiro Oda, Leonard M. G. Chavas, Masato Akutsu, Yusuke Yamada, Masato Kawasaki, Naohiro Matsugaki, Noriyuki Igarashi, Mamoru Suzuki, Soichi Wakatsuki
Development of an automated large-scale protein-crystallization and monitoring system for high-throughput protein-structure analyses 
Acta Crystallographica Sect D62, 1058–1065 (2006)

Masamichi Nagae, Akira Nozawa, Nozomu Koizumi, Hiroshi Sano, Hiroshi Hashimoto, Mamoru Sato, Toshiyuki Shimizu
The crystal structure of the novel calcium binding protein AtCBL2 from Arabidopsis thaliana 
Journal of Biological Chemistry 278, 42240-42246 (2003)

Masamichi Nagae, Akira Nozawa, Nozomu Koizumi, Hiroshi Sano, Hiroshi Hashimoto, Mamoru Sato, Toshiyuki Shimizu
Crystallization and preliminary X-ray characterization of novel calcium binding protein AtCBL2 from Arabidopsis thaliana 
Acta Crystallographica Sect D59, 1079-1080 (2003)

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